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Annals of Pharmacology and Pharmaceutics
Research Article
Published: 18 Jun, 2021
Inhibition of the Binding of Variants of SARS-CoV-2
Coronavirus Spike Protein to a Human Receptor by
Chlorine Dioxide
Norio Ogata* and Takanori Miura
Department of R&D, Taiko Pharmaceutical Co., Ltd, Japan
Abstract
Aim: COVID-19 caused by a new coronavirus, SARS-CoV-2, has become an ongoing worldwide pandemic. A safe and potent virucidal disinfection system is urgently needed to protect the population from the virus. Chlorine Dioxide (ClO2) is a powerful disinfectant that is known to inactivate both viruses and bacteria. The aim of this study was to investigate whether chlorine dioxide inhibits the binding of the receptor-binding domain of the Spike protein (S protein) from variant coronavirus (British and South African variants) to human receptor, Angiotensin-Converting Enzyme 2 (ACE2).
Materials and Methods: In vitro experiments to determine binding of the purified receptor-binding domain of spike protein to ACE2 were performed in the presence of various concentrations of chlorine dioxide. Purified spike proteins from the British and South African variants were used. Spike protein coated onto a microtiter plate was treated with chlorine dioxide aqueous solution or chlorine dioxide spray solution.
Result: Binding of variant spike proteins was inhibited in a concentration-dependent manner (50% Inhibitory Concentration (IC50) of 7.6 μmol/L and 5.8 μmol/L for the British and the South African variants, respectively).
Conclusion: These findings show that chlorine dioxide aqueous solution can inactivate the binding of the variant spike proteins to the human ACE2 receptor protein, indicating that this strategy may be useful in blocking the transmission of variant SARS-CoV-2 viruses.
Keywords: Chlorine dioxide; COVID-19; SARS-CoV-2; Virus; Disinfection; IC50
Introduction
Coronavirus Disease 2019 (COVID-19) is caused by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and has become a serious health issue since its emergence in late 2019 [1,2]. The outbreak of this disease originated in Wuhan, Hubei Province, China, before spreading rapidly throughout the world [2]. The COVID-19 pandemic was declared an international emergency in 2020 [3]. As of May 2021, global death toll due to COVID-19 is estimated to be approximately 3.3 million [4]. SARS-CoV-2 is an enveloped virus and has a single-stranded negative-sense RNA genome of 29.9 kilobases [5]. The virus attaches to the host cell surface of type I and II pneumocytes, endothelial cells and ciliated bronchial epithelial cells [6]. Although several vaccines against the disease have already been developed and administered [7], the pandemic has not yet ended. Furthermore, currently variant types of SARS-CoV-2 virus have been reported from England (B.1.1.7 variant) and South Africa (variant B.1.351) that appear to be spread more readily than the original virus [8]. Both of these variants carry a common mutation (N501Y) in the Receptor-Binding Domain (RBD) of the spike protein (S protein) [5]. This mutation is important in binding of the spike protein to human cell surface receptor, Angiotensin-Converting Enzyme 2 (ACE2), a type I transmembrane glycoprotein with carboxypeptidase activity [5].
To control the spread of COVID-19, it is essential to develop and deploy safe but effective disinfectants against the virus alongside novel antiviral drugs and vaccines [8]. While ethanol is known to be effective against the virus [9], it cannot eradicate the virus present in the air. Chlorine Dioxide (ClO2) (CD) is a water-soluble yellow gas at room temperature and is a stable free radical [10]. CD can be used as a gas or an aqueous solution to inactivate both viruses and bacteria [11-15]. The powerful disinfection action of CD against microbes is due to its strong oxidizing activity against proteins [16]. Moreover, safe and permissible concentrations of CD have been well documented
OPEN ACCESS
*Correspondence:
Norio Ogata, Department of R&D, Taiko Pharmaceutical Co., Ltd., 1-2-1 Hikaridai, Seikacho, 619-0237 Kyoto,
Japan, Tel: 81 774 98 2716; Fax: 81 774 98 2737; E-mail: nogata7@yahoo.co.jp Received Date: 21 May 2021 Accepted Date: 16 Jun 2021 Published Date: 18 Jun 2021
Citation:
Ogata N, Miura T. Inhibition of the Binding of Variants of SARS-CoV-2 Coronavirus Spike Protein to a Human Receptor by Chlorine Dioxide. Ann Pharmacol Pharm. 2021; 6(1): 1199.
Copyright © 2021 Norio Ogata. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
Norio Ogata, et al.,
Annals of Pharmacology and Pharmaceutics
[17]. Here, we demonstrate that CD aqueous solutions can inactivate the binding of the spike proteins of both the British and South African variant to human ACE2 in in vitro experiments, suggesting it may be effective at inhibiting infection of the SARS-CoV-2 virus.
Materials and Methods
Chemicals
CD, prepared in our laboratory as described previously [16], was dissolved in purified water and stored at 4oC in a tightly capped amber bottle. The stock CD was diluted in purified water to the desired concentration immediately prior to use. A commercially available CD spray solution sold under the brand name of Cleverin (Taiko Pharmaceutical, Osaka, Japan) was also tested. The composition of Cleverin was 1.48 mmol/L CD, 66.34 mmol/L sodium chlorite, 8.70 mmol/L sodium dihydrogen phosphates, 0.24 % (weight/weight) decaglycerol monolaurate, 0.06 % silicone and 98.97 % water, pH 6.01. A tightly capped bottle of the spray solution made 3 years ago, kept at room temperature and protected from the light was used. The CD concentration of the spray solution at the time of the experiment was 1.80 mmol/L (121 ppm (weight/weight)). The spray solution was diluted as required with purified water immediately prior to the experiment.
Binding assay
The spike protein binding assay kit was purchased from BPS Bioscience (San Diego, California, USA). The kit codes for the British and South African variant assay were 78140 and 78151, respectively. The kits consisted of purified Receptor-Binding Domain (RBD) of spike proteins derived from the corresponding variant virus. The kit was used as recommended by the manufacturer with some modifications. The spike protein RBD provided in the kit was first coated onto a 96-well microtiter plate from the kit as indicated by the manual. A 50 μL aliquot of CD or CD spray solution diluted to an appropriate concentration was placed in each well and incubated at 25oC for 5 min. Next, a 20 μL aliquot of 10 mmol/L sodium thiosulfate in Blocking Buffer 2 provided in the kit was added to each well to terminate the reaction of CD with the protein. Under this condition, the CD is rapidly converted to ClO2- and becomes unreactive with proteins [16]. Next, a 35 μL aliquot of biotin-labeled ACE2 diluted to 1.5 μg/mL by Blocking Buffer 2 was added to each well. Biotin-labeled ACE2 was then bound to streptavidin-labeled horseradish peroxidase and detected using a substrate of the horseradish peroxidase supplied in the kit. The Chemiluminescence signal was measured after 1 min using a luminometer (model SH-9000; Corona Electric, Hitachinaka, Ibaraki, Japan). Each concentration of CD was assayed in four wells (n=4). Because the chemiluminescence intensity fluctuated between experiments, the final data was normalized (i.e. 0 μg/ml CD as 100%).
Results and Discussion
As shown in Figure 1, the intensity of the binding of human ACE2 protein to the spike protein RBD decreased with increasing concentrations of CD. The concentration of aqueous CD solution required to give 50% binding inhibition (IC50) was 7.6 μmol/L and 5.8 μmol/L for the British and South African variant, respectively (Table 1). An inhibitory effect of CD was also observed using the CD spray solution (Figure 2). Specifically, IC50 for the binding of ACE2 to the spike protein RBD was 15.3 μmol/L and 4.7 μmol/L for the British and South African variant, respectively (Table 1). Moreover, binding of the Wuhan strain spike protein RBD to ACE2 was also inhibited by the CD aqueous solution with an IC50 of 6.5 μmol/L
Table 1: The concentration of Chlorine Dioxide (CD) aqueous solution required to inhibit binding of the receptor-binding domain of variant SARS-CoV-2 spike proteins (S proteins) to human receptor protein ACE2 by 50% (IC50) is shown.
Variants of spike protein Receptor-Binding Domain (RBD) were treated with either Chlorine Dioxide (CD) aqueous solution or CD spray solution at various concentrations, and then assayed for its binding ability to the receptor protein ACE2
(Ogata N, unpublished data). There were slight differences in the inhibitory effect between aqueous CD and the CD spray solution in these experiments. The observed differences may be due to the effect of other constituents in the spray solution, which are added to prolong the shelf life of the product. These results suggest all the CD solutions are effective in inactivating the binding of the SARS-CoV-2 virus to human cell receptor ACE2. As such, CD is likely to have an inhibitory action on the infection of the virus.
The spike protein RBD of SARS-CoV-2 virus is located in the S1
Figure 1: Effects of chlorine dioxide (CD) aqueous solution on the binding of the Receptor-Binding Domain (RBD) of variants of spike protein of SARS- CoV-2 virus to human Angiotensin-Converting Enzyme 2 (ACE2) in in vitro experiments. Binding of the spike protein of the British variant (filled circles) and the South African variant (open circles) to ACE2 are shown. Each point represents an average ± standard deviation of four experiments (n=4).
Figure 2: Effects of the Chlorine Dioxide (CD) spray solution on the binding of the Receptor-Binding Domain (RBD) of variants of spike protein of SARS- CoV-2 virus to human Angiotensin-Converting Enzyme 2 (ACE2) in in vitro experiments. Binding of the spike protein of the British variant (filled circles) and the South African variant (open circles) to ACE2 are shown. Each point represents an average ± standard deviation of four experiments (n=4).
IC50 (μmol/L) |
|
CD aqueous solution against |
|
British variant |
7.6 |
South African variant |
5.8 |
CD spray solution against |
|
British variant |
15.3 |
South African variant |
4.7 |
Remedy Publications LLC.
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2021 | Volume 6 | Issue 1 | Article 1199
Norio Ogata, et al.,
Annals of Pharmacology and Pharmaceutics
subunit of the spike protein, and the region of RBD that interacts with ACE2 consists of a small patch of 25 amino acid residues [18].
The asparagine 501 (N501) residues, which is mutated to tyrosine in both viral variants, forms part of the RBD patch region of the spike protein [5]. The N501Y mutation is thought to result in enhanced viral transmissibility by increasing the binding affinity to human ACE2 [18]. Furthermore, it is worth noting that this mutation allows the virus to escape from many antibodies raised against the virus [18], suggesting poor effectiveness of vaccines against these variant strains of SARS-CoV-2 virus. We previously demonstrated that the binding of the spike protein RBD of the Wuhan strain to human ACE2 is inhibited by CD aqueous solution [19]. These findings suggested CD may be useful as a disinfectant against virus. Although the mechanism of this inhibition has not been elucidated, we speculated that it may involve oxidization of the tyrosine 453 residue of the RBD of the spike protein, which forms a hydrogen bond with ACE2 [19]. Indeed, CD is known to oxidize tyrosine residues in proteins [16]. Because asparagine 501 is mutated to tyrosine (Y) in the variant strains, treatment of the virus with CD may also oxidize 501Y. Given that vaccines appear to have diminished effectiveness against the variant viruses, disinfection systems employing CD may be invaluable. It is also important to note that CD is a gas at room temperature and can be used in this form to inactivate microbes floating in the air at concentrations deemed safe to human health [17]. As such, gaseous CD could be used to inactivate the SARS-CoV-2 virus floating in the air of a crowded room.
Conclusion
CD solution, whether in water or as a formulated spray solution in water, was found to potently inhibit the binding of spike protein RBD to human receptor protein ACE2 in a concentration-dependent manner. These findings suggest CD may be invaluable for inhibiting the infection of SARS-CoV-2 virus to human.
Acknowledgement
The authors are employees of Taiko Pharmaceutical Co., Ltd. This work was supported by the company.
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